Article | Proceedings of The American Modelica Conference 2018, October 9-10, Somberg Conference Center, Cambridge MA, USA | Modelica language – a promising tool for publishing and sharing biomedical models Linköping University Electronic Press Conference Proceedings
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Title:
Modelica language – a promising tool for publishing and sharing biomedical models
Author:
Jirí Kofránek: Department of Pathophysiology, 1st Faculty of Medicine, Charles University, Czechia Filip Ježek: Department of Pathophysiology, 1st Faculty of Medicine, Charles University, Czechia Marek Mateják: Department of Pathophysiology, 1st Faculty of Medicine, Charles University, Czechia
DOI:
10.3384/ecp18154196
Download:
Full text (pdf)
Year:
2018
Conference:
Proceedings of The American Modelica Conference 2018, October 9-10, Somberg Conference Center, Cambridge MA, USA
Issue:
154
Article no.:
021
Pages:
196-205
No. of pages:
10
Publication type:
Abstract and Fulltext
Published:
2019-02-26
ISBN:
978-91-7685-148-7
Series:
Linköping Electronic Conference Proceedings
ISSN (print):
1650-3686
ISSN (online):
1650-3740
Publisher:
Linköping University Electronic Press, Linköpings universitet


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Current biomedical models are so extensive that their description (and reproducibility) requires more than a set of equations. Journal papers are thus frequently accompanied by electronic enclosures with detailed model descriptions, or even better, with a complete model source code. Specific electronic archives associated with specific languages and publicly accessible simulation platforms for the creation and archiving of biomedical models have been set up, however each of them has some disadvantage and an agreement on a common language for model sharing is missing. This paper reviews the usage of the languages for physiological modeling and discusses the advantages of the Modelica language in the area of physiological simulations.

Keywords: Physiology, Integrative models, Physiome project, Biomedical models archiving, Biomedical models publishing

Proceedings of The American Modelica Conference 2018, October 9-10, Somberg Conference Center, Cambridge MA, USA

Author:
Jirí Kofránek, Filip Ježek, Marek Mateják
Title:
Modelica language – a promising tool for publishing and sharing biomedical models
DOI:
http://dx.doi.org/10.3384/ecp18154196
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Proceedings of The American Modelica Conference 2018, October 9-10, Somberg Conference Center, Cambridge MA, USA

Author:
Jirí Kofránek, Filip Ježek, Marek Mateják
Title:
Modelica language – a promising tool for publishing and sharing biomedical models
DOI:
https://doi.org10.3384/ecp18154196
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Last updated: 2019-06-04