Publications for Jesper Tegnér
Co-author map based on ISI articles 2007-

Publications mentioned in social media 11 times*

Keywords

whole-genome synaptic regulatory prefrontal patients neural model mice memory learning genes gene development cortex computational cellular brain biological atherosclerosis algorithm

Journal Articles

Timothy Ravasi, Harukazu Suzuki, Carlo Vittorio Cannistraci, Shintaro Katayama, Vladimir B Bajic, Kai Tan, Altuna Akalin, Sebastian Schmeier, Mutsumi Kanamori-Katayama, Nicolas Bertin, Piero Carninci, Carsten O Daub, Alistair R R Forrest, Julian Gough, Sean Grimmond, Jung-Hoon Han, Takehiro Hashimoto, Winston Hide, Oliver Hofmann, Hideya Kawaji, Atsutaka Kubosaki, Timo Lassmann, Erik van Nimwegen, Chihiro Ogawa, Rohan D Teasdale, Jesper Tegnér, Boris Lenhard, Sarah A Teichmann, Takahiro Arakawa, Noriko Ninomiya, Kayoko Murakami, Michihira Tagami, Shiro Fukuda, Kengo Imamura, Chikatoshi Kai, Ryoko Ishihara, Yayoi Kitazume, Jun Kawai, David A Hume, Trey Ideker and Yoshihide Hayashizaki
  An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man
 
Altmetric usage: 5

  CELL, 2010, 140(5), 744-752.
 Web of Science® Times Cited: 197

Sara Hägg, Josefin Skogsberg, Jesper Lundström, Peri Noori, Roland Nilsson, Hua Zhong, Shohreh Maleki, Ming-Mei Shang, Björn Brinne, Maria Bradshaw, Vladimir B. Bajic, Ann Samnegård, Angela Silveira, Lee M. Kaplan, Bruna Gigante, Karin Leander, Ulf de Faire, Stefan Rosfors, Ulf Lockowandt, Jan Liska, Peter Konrad, Rabbe Takolander, Anders Franco-Cereceda, Eric E. Schadt, Torbjörn Ivert, Anders Hamsten, Jesper Tegnér and Johan Björkegren
  Multi-Organ Expression Profiling Uncovers a Gene Module in Coronary Artery Disease Involving Transendothelial Migration of Leukocytes and LIM Domain Binding 2: The Stockholm Atherosclerosis Gene Expression (STAGE) Study
  PLoS Genetics, 2009, 5(12), e1000754.
 Web of Science® Times Cited: 19

Jose M. Peña, Roland Nilsson, Johan Bjorkegren and Jesper Tegnér
  An Algorithm for Reading Dependencies from the Minimal Undirected Independence Map of a Graphoid that Satisfies Weak Transitivity
  JOURNAL OF MACHINE LEARNING RESEARCH, 2009, 10, 1071-1094.
 Web of Science® Times Cited: 3

Mika Gustafsson, Michael Hörnquist, J Bjorkegren and Jesper Tegnér
  Genome-wide system analysis reveals stable yet flexible network dynamics in yeast
  IET SYSTEMS BIOLOGY, 2009, 3(4), 219-228.
   Fulltext  PDF  
 Web of Science® Times Cited: 5

Mika Gustafsson, Michael Hörnquist, Jesper Tegnér and et al. 155 external authors
  The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
 
Altmetric usage: 2

  Nature Genetics, 2009, 41, 553-562.
 Web of Science® Times Cited: 182

Mika Gustafsson, Michael Hörnquist, Jesper Lundstrom, Johan Bjorkegren and Jesper Tegnér
  Reverse Engineering of Gene Networks with LASSO and Nonlinear Basis Functions
  CHALLENGES OF SYSTEMS BIOLOGY: COMMUNITY EFFORTS TO HARNESS BIOLOGICAL COMPLEXITY, 2009, 1158, 265-275.
   Fulltext  PDF  
 Web of Science® Times Cited: 8

Fredrik Edin, Torkel Klingberg, Par Johansson, Fiona McNab, Jesper Tegnér and Albert Compte
  Mechanism for top-down control of working memory capacity
 
Altmetric usage: 1

  PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106(16), 6802-6807.
 Web of Science® Times Cited: 75

Olivia Eriksson, Björn Brinne, Y Zhou, J Bjorkegren and Jesper Tegnér
  Deconstructing the core dynamics from a complex time-lagged regulatory biological circuit
  IET SYSTEMS BIOLOGY, 2009, 3(2), 113-23.
 Web of Science® Times Cited: 4

Roland Nilsson, Johan Bjorkegren and Jesper Tegnér
  On reliable discovery of molecular signatures
 
Altmetric usage: 1

  BMC BIOINFORMATICS, 2009, 10(38), .
   Fulltext  PDF  
 Web of Science® Times Cited: 6

J. Skogsberg, J. Lundstrom, A. Kovacs, Roland Nilsson, P. Noori, S. Maleki, M. Kohler, A. Hamsten, Jesper Tegnér and J. Bjorkegren
  Transcriptional profiling uncovers a network of cholesterol-responsive atherosclerosis target genes
  PLoS Genetics, 2008, 4(3), .
 Web of Science® Times Cited: 26

I. Shemer, Björn Brinne, Jesper Tegnér and S. Grillner
  Electrotonic signals along intracellular membranes may interconnect dendritic spines and nucleus
 
Altmetric usage: 1

  PloS Computational Biology, 2008, 4(3), .
 Web of Science® Times Cited: 12

K. Tan, Jesper Tegnér and T. Ravasi
  Integrated approaches to uncovering transcription regulatory networks in mammalian cells
  Genomics, 2008, 91(3), 219-231.
 Web of Science® Times Cited: 18

J. Skogsberg, A. Dicker, M. Ryden, G. Astrom, Roland Nilsson, H. Bhuiyan, S. Vitols, A. Mairal, D. Langin, P. Alberts, E. Walum, Jesper Tegnér, A. Hamsten, P. Arner and J. Bjorkegren
  ApoB100-LDL acts as a metabolic signal from liver to peripheral fat causing inhibition of lipolysis in adipocytes
  PLoS ONE, 2008, 3(11), .
 Web of Science® Times Cited: 6

Jesper Tegnér and Johan Bjorkegren
  Perturbations to uncover gene networks
  Trends in Genetics, 2007, 23(1), 34-41.
 Web of Science® Times Cited: 26

Pernille Olesen, Julian Macoveanu, Jesper Tegnér and Torkel Klingberg
  Brain activity related to working memory and distraction in children and adults
 
Altmetric usage: 1

  Cerebral Cortex, 2007, 17(5), 1047-1054.
 Web of Science® Times Cited: 57

Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
  Consistent feature selection for pattern recognition in polynomial time
  Journal of machine learning research, 2007, 8, 589-612.
 Web of Science® Times Cited: 18

Julian Macoveanu, Torkel Klingberg and Jesper Tegnér
  Neuronal firing rates account for distractor effects on mnemonic accuracy in a visuo-spatial working memory task
  Biological Cybernetics, 2007, 96(4), 407-419.
 Web of Science® Times Cited: 2

Jesper Tegnér, Skogsberg Josefin and Johan Björkegren
  Multi-organ whole-genome measurements and reverse engineering to uncover gene networks underlying complex traits
  Journal of Lipid Research, 2007, 48(2), 267-277.
 Web of Science® Times Cited: 12

Fredrik Edin, Julian Macoveanu, Pernille J. Olesen, Jesper Tegnér and Torkel Klingberg
  Stronger synaptic connectivity as a mechanism behind development of working memory-related brain activity during childhood
  Journal of cognitive neuroscience, 2007, 19(5), 750-760.
 Web of Science® Times Cited: 47

Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
  Towards scalable and data efficient learning of Markov boundaries
  International Journal of Approximate Reasoning, 2007, 45(2), 211-232.
 Web of Science® Times Cited: 36

Alexander Kovacs, Per Tornvall, Roland Nilsson, Jesper Tegnér, Anders Hamsten and Johan Björkegren
  Human C-reactive protein slows atherosclerosis development in a mouse model with human-like hypercholesterolemia
  Proceedings of the National Academy of Sciences of the United States of America, 2007, 104(34), 13768-13773.
 Web of Science® Times Cited: 63

Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
  Detecting Multivariate Differentially Expressed Genes
  BMC Bioinformatics, 2007, 8:150, .
 Web of Science® Times Cited: 8

Jesper Tegnér, Roland Nilsson, V.B. Bajic, J. Bjorkegren and T. Ravasi
  Systems biology of innate immunity
  Cellular Immunology, 2006, 244(2), 105-109.
 Web of Science® Times Cited: 23

Julian Macoveanu, T. Klingberg and Jesper Tegnér
  A biophysical model of multiple-item working memory: A computational and neuroimaging study
  Neuroscience, 2006, 141(3), 1611-1618.
 Web of Science® Times Cited: 18

Roland Nilsson, VB Bajic, H Suzuki, D di Bernardo, J. Björkegren, S Katayama, JF Reid, MJ Sweet, M Gariboldi, P Carninci, Y Hayashizaki, DA Hume, Jesper Tegnér and T Ravasi
  Trancriptional network dynamics in macrophage activation
  Genomics, 2006, 88:2, 133-142.
 Web of Science® Times Cited: 62

Kristofer Hallén, Johan Björkegren and Jesper Tegnér
  Detection of compound mode of action by computational integration of whole-genome measurements and genetic perturbations
  BMC Bioinformatics, 2006, 7, .
 Web of Science® Times Cited: 10

Roland Nilsson, Johan Björkegren and Jesper Tegnér
  A flexible implementation for support vector machines
  The Mathematica journal, 2006, 10, 114-127.

Jose M. Peña, J. Bjorkegren and Jesper Tegnér
  Growing Bayesian network models of gene networks from seed genes
  Bioinformatics, 2005, 21(SUPPL. 2), .
 Web of Science® Times Cited: 34

Jose M. Peña, J. Bjorkegren and Jesper Tegnér
  Learning dynamic Bayesian network models via cross-validation
  Pattern Recognition Letters, 2005, 26(14), 2295-2308.
 Web of Science® Times Cited: 6

Roland Nilsson, Jesper Tegnér and et. al.
  The transcriptional landscape of the mammalian genome
  Science, 2005, 309(5740), 1559-1563.

X.-J. Wang, Jesper Tegnér, C. Constantinidis and P.S. Goldman-Rakic
  Division of labor among distinct subtypes of inhibitory neurons in a cortical microcircuit of working memory
  Proceedings of the National Academy of Sciences of the United States of America, 2004, 101(5), 1368-1373.
 Web of Science® Times Cited: 120

Jesper Tegnér, M.K.S. Yeung, J. Hasty and J.J. Collins
  Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling
  Proceedings of the National Academy of Sciences of the United States of America, 2003, 100(10), 5944-5949.
 Web of Science® Times Cited: 222

A. Sandberg, Jesper Tegnér and A. Lansner
  A working memory model based on fast Hebbian learning
  Network, 2003, 14(4), 789-802.
 Web of Science® Times Cited: 22

M. Ehrenberg, J. Elf, E. Aurell, R. Sandberg and Jesper Tegnér
  Systems biology is taking off
  Genome Research, 2003, 13(11), 2377-2380.
 Web of Science® Times Cited: 21

A. Compte, C. Constantinidis, Jesper Tegnér, S. Raghavachari, M.V. Chafee, P.S. Goldman-Rakic and X.-J. Wang
  Temporally Irregular Mnemonic Persistent Activity in Prefrontal Neurons of Monkeys during a Delayed Response Task
  Journal of Neurophysiology, 2003, 90(5), 3441-3454.
 Web of Science® Times Cited: 93

A. Kepecs, Rossum M.C.W. Van, S. Song and Jesper Tegnér
  Spike-timing-dependent plasticity: Common themes and divergent vistas
  Biological cybernetics, 2002, 87(5-6), 446-458.
 Web of Science® Times Cited: 60

Chapters in Books

Jose M. Peña, Johan Björkegren and Jesper Tegnér
  Learning and validating Bayesian network models of gene networks
  Advances in Probabilistic Graphical Models, Springer Verlag, 2007, 359-376.


Jose M. Peña, Johan Björkegren and Jesper Tegnér
  Scalable, efficient and correct learning of Markov boundaries under the faithfulness assumption
  Symbolic and Quantitative Approaches to Reasoning with Uncertainty: 8th European Conference, ECSQARU 2005, Barcelona, Spain, July 6-8, 2005. Proceedings, Springer Berlin/Heidelberg, 2005, 136-147.


Conference Articles

Mika Gustafsson, Michael Hörnquist, Johan Björkegren and Jesper Tegnér
  Soft Integration of Data for Reverse Engineering
  International Conference on Systems Biology,2008, 2008.


Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
  Reading Dependencies from the Minimal Undirected Independence Map of a Graphoid that Satisfies Weak Transitivity
  3rd European Workshop on Probabilistic Graphical Models PGM2006,2006, 2006.


Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
  Identifying relevant nodes without learning the model
  22nd Conference on Uncertainty in Artificial Intelligence,2006, 2006.


Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
  Evaluating feature selection for SVMs in high dimensions
  17th European Conference on Machine Learning,2006, 2006.


 Web of Science® Times Cited: 2

Ph.D. Theses

Sara Hägg
  Gene Expression Profiling of Human Atherosclerosis
  2009.


  Fulltext PDF

Roland Nilsson
  Statistical Feature Selection: With Applications in Life Science
  2007.


  Fulltext PDF

* Social media data based on publications from 2011 to present and with a DOI; data delivered by Altmetric.com.