Publications for Jesper Tegnér
Co-author map based on ISI articles 2007-
Journal Articles
Timothy Ravasi, Harukazu Suzuki, Carlo Vittorio Cannistraci, Shintaro Katayama, Vladimir B Bajic, Kai Tan, Altuna Akalin, Sebastian Schmeier, Mutsumi Kanamori-Katayama, Nicolas Bertin, Piero Carninci, Carsten O Daub, Alistair R R Forrest, Julian Gough, Sean Grimmond, Jung-Hoon Han, Takehiro Hashimoto, Winston Hide, Oliver Hofmann, Hideya Kawaji, Atsutaka Kubosaki, Timo Lassmann, Erik van Nimwegen, Chihiro Ogawa, Rohan D Teasdale, Jesper Tegnér, Boris Lenhard, Sarah A Teichmann, Takahiro Arakawa, Noriko Ninomiya, Kayoko Murakami, Michihira Tagami, Shiro Fukuda, Kengo Imamura, Chikatoshi Kai, Ryoko Ishihara, Yayoi Kitazume, Jun Kawai, David A Hume, Trey Ideker and Yoshihide Hayashizaki
An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man
CELL, 2010, 140(5), 744-752.
Web of Science® Times Cited: 127 |
Sara Hägg, Josefin Skogsberg, Jesper Lundström, Peri Noori, Roland Nilsson, Hua Zhong, Shohreh Maleki, Ming-Mei Shang, Björn Brinne, Maria Bradshaw, Vladimir B. Bajic, Ann Samnegård, Angela Silveira, Lee M. Kaplan, Bruna Gigante, Karin Leander, Ulf de Faire, Stefan Rosfors, Ulf Lockowandt, Jan Liska, Peter Konrad, Rabbe Takolander, Anders Franco-Cereceda, Eric E. Schadt, Torbjörn Ivert, Anders Hamsten, Jesper Tegnér and Johan Björkegren
Multi-Organ Expression Profiling Uncovers a Gene Module in Coronary Artery Disease Involving Transendothelial Migration of Leukocytes and LIM Domain Binding 2: The Stockholm Atherosclerosis Gene Expression (STAGE) Study
PLoS Genetics, 2009, 5(12), e1000754.
Web of Science® Times Cited: 13 |
Mika Gustafsson, Michael Hörnquist, J Bjorkegren and Jesper Tegnér
Genome-wide system analysis reveals stable yet flexible network dynamics in yeast
IET SYSTEMS BIOLOGY, 2009, 3(4), 219-228.
Fulltext  Web of Science® Times Cited: 5 |
Mika Gustafsson, Michael Hörnquist, Jesper Tegnér and et al. 155 external authors
The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line
Nature Genetics, 2009, 41, 553-562.
Web of Science® Times Cited: 138 |
Mika Gustafsson, Michael Hörnquist, Jesper Lundstrom, Johan Bjorkegren and Jesper Tegnér
Reverse Engineering of Gene Networks with LASSO and Nonlinear Basis Functions
CHALLENGES OF SYSTEMS BIOLOGY: COMMUNITY EFFORTS TO HARNESS BIOLOGICAL COMPLEXITY, 2009, 1158, 265-275.
Fulltext Web of Science® Times Cited: 7 |
Fredrik Edin, Torkel Klingberg, Par Johansson, Fiona McNab, Jesper Tegnér and Albert Compte
Mechanism for top-down control of working memory capacity
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106(16), 6802-6807.
Web of Science® Times Cited: 54 |
Olivia Eriksson, Björn Brinne, Y Zhou, J Bjorkegren and Jesper Tegnér
Deconstructing the core dynamics from a complex time-lagged regulatory biological circuit
IET SYSTEMS BIOLOGY, 2009, 3(2), 113-23.
Web of Science® Times Cited: 4 |
Roland Nilsson, Johan Bjorkegren and Jesper Tegnér
On reliable discovery of molecular signatures
BMC BIOINFORMATICS, 2009, 10(38), .
Fulltext Web of Science® Times Cited: 4 |
Jose M. Peña, Roland Nilsson, Johan Bjorkegren and Jesper Tegnér
An Algorithm for Reading Dependencies from the Minimal Undirected Independence Map of a Graphoid that Satisfies Weak Transitivity
JOURNAL OF MACHINE LEARNING RESEARCH, 2009, 10, 1071-1094.
Web of Science® Times Cited: 2 |
J. Skogsberg, J. Lundstrom, A. Kovacs, Roland Nilsson, P. Noori, S. Maleki, M. Kohler, A. Hamsten, Jesper Tegnér and J. Bjorkegren
Transcriptional profiling uncovers a network of cholesterol-responsive atherosclerosis target genes
PLoS Genetics, 2008, 4(3), .
Web of Science® Times Cited: 21 |
I. Shemer, Björn Brinne, Jesper Tegnér and S. Grillner
Electrotonic signals along intracellular membranes may interconnect dendritic spines and nucleus
PloS Computational Biology, 2008, 4(3), .
Web of Science® Times Cited: 9 |
K. Tan, Jesper Tegnér and T. Ravasi
Integrated approaches to uncovering transcription regulatory networks in mammalian cells
Genomics, 2008, 91(3), 219-231.
Web of Science® Times Cited: 17 |
J. Skogsberg, A. Dicker, M. Ryden, G. Astrom, Roland Nilsson, H. Bhuiyan, S. Vitols, A. Mairal, D. Langin, P. Alberts, E. Walum, Jesper Tegnér, A. Hamsten, P. Arner and J. Bjorkegren
ApoB100-LDL acts as a metabolic signal from liver to peripheral fat causing inhibition of lipolysis in adipocytes
PLoS ONE, 2008, 3(11), .
Web of Science® Times Cited: 5 |
Jesper Tegnér and J. Bjorkegren
Perturbations to uncover gene networks
Trends in Genetics, 2007, 23(1), 34-41.
Web of Science® Times Cited: 23 |
P.J. Olesen, Julian Macoveanu, Jesper Tegnér and T. Klingberg
Brain activity related to working memory and distraction in children and adults
Cerebral Cortex, 2007, 17(5), 1047-1054.
Web of Science® Times Cited: 49 |
Julian Macoveanu, Torkel Klingberg and Jesper Tegnér
Neuronal firing rates account for distractor effects on mnemonic accuracy in a visuo-spatial working memory task
, 2007, , .
Web of Science® Times Cited: 1 |
Jesper Tegnér, Skogsberg Josefin and Johan Björkegren
Multi-organ whole-genome measurements and reverse engineering to uncover gene networks underlying complex traits
Journal of Lipid Research, 2007, 48(2), 267-277.
Web of Science® Times Cited: 11 |
Jesper Tegnér and Johan Björkegren
Perturbations to uncover gene networks
Trends in genetics : DNA, differentiation & development, 2007, 23:1, 34-41.
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Fredrik Edin, Julian Macoveanu, Pernille J. Olesen, Jesper Tegnér and Torkel Klingberg
Stronger synaptic connectivity as a mechanism behind development of working memory-related brain activity during childhood
Journal of cognitive neuroscience, 2007, 19(5), 750-760.
Web of Science® Times Cited: 35 |
Alexander Kovacs, Per Tornvall, Roland Nilsson, Jesper Tegnér, Anders Hamsten and Johan Björkegren
Human C-reactive protein slows atherosclerosis development in a mouse model with human-like hypercholesterolemia
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104(34), 13768-13773.
Web of Science® Times Cited: 57 |
Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
Consistent feature selection for pattern recognition in polynomial time
Journal of machine learning research, 2007, 8, 589-612.
Web of Science® Times Cited: 16 |
Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
Detecting Multivariate Differentially Expressed Genes
BMC Bioinformatics, 2007, 8:150, .
Web of Science® Times Cited: 7 |
Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
Towards scalable and data efficient learning of Markov boundaries
International Journal of Approximate Reasoning, 2007, 45(2), 211-232.
Web of Science® Times Cited: 33 |
Jesper Tegnér, Roland Nilsson, V.B. Bajic, J. Bjorkegren and T. Ravasi
Systems biology of innate immunity
Cellular Immunology, 2006, 244(2), 105-109.
Web of Science® Times Cited: 21 |
Julian Macoveanu, T. Klingberg and Jesper Tegnér
A biophysical model of multiple-item working memory: A computational and neuroimaging study
Neuroscience, 2006, 141(3), 1611-1618.
Web of Science® Times Cited: 15 |
Roland Nilsson, VB Bajic, H Suzuki, D di Bernardo, J. Björkegren, S Katayama, JF Reid, MJ Sweet, M Gariboldi, P Carninci, Y Hayashizaki, DA Hume, Jesper Tegnér and T Ravasi
Trancriptional network dynamics in macrophage activation
Genomics, 2006, 88:2, 133-142.
Web of Science® Times Cited: 56 |
Kristofer Hallén, Johan Björkegren and Jesper Tegnér
Detection of compound mode of action by computational integration of whole-genome measurements and genetic perturbations
BMC Bioinformatics, 2006, 7, .
Web of Science® Times Cited: 8 |
Roland Nilsson, Johan Björkegren and Jesper Tegnér
A flexible implementation for support vector machines
The Mathematica journal, 2006, 10, 114-127.
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Roland Nilsson, Jesper Tegnér and et. al.
The transcriptional landscape of the mammalian genome
Science, 2005, 309(5740), 1559-1563.
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Jose M. Peña, J. Bjorkegren and Jesper Tegnér
Growing Bayesian network models of gene networks from seed genes
Bioinformatics, 2005, 21(SUPPL. 2), .
Web of Science® Times Cited: 32 |
Jose M. Peña, J. Bjorkegren and Jesper Tegnér
Learning dynamic Bayesian network models via cross-validation
Pattern Recognition Letters, 2005, 26(14), 2295-2308.
Web of Science® Times Cited: 6 |
X.-J. Wang, Jesper Tegnér, C. Constantinidis and P.S. Goldman-Rakic
Division of labor among distinct subtypes of inhibitory neurons in a cortical microcircuit of working memory
Proceedings of the National Academy of Sciences of the United States of America, 2004, 101(5), 1368-1373.
Web of Science® Times Cited: 108 |
Jesper Tegnér, M.K.S. Yeung, J. Hasty and J.J. Collins
Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling
Proceedings of the National Academy of Sciences of the United States of America, 2003, 100(10), 5944-5949.
Web of Science® Times Cited: 203 |
A. Sandberg, Jesper Tegnér and A. Lansner
A working memory model based on fast Hebbian learning
Network, 2003, 14(4), 789-802.
Web of Science® Times Cited: 19 |
M. Ehrenberg, J. Elf, E. Aurell, R. Sandberg and Jesper Tegnér
Systems biology is taking off
Genome Research, 2003, 13(11), 2377-2380.
Web of Science® Times Cited: 21 |
A. Compte, C. Constantinidis, Jesper Tegnér, S. Raghavachari, M.V. Chafee, P.S. Goldman-Rakic and X.-J. Wang
Temporally Irregular Mnemonic Persistent Activity in Prefrontal Neurons of Monkeys during a Delayed Response Task
Journal of Neurophysiology, 2003, 90(5), 3441-3454.
Web of Science® Times Cited: 81 |
A. Kepecs, Rossum M.C.W. Van, S. Song and Jesper Tegnér
Spike-timing-dependent plasticity: Common themes and divergent vistas
Biological cybernetics, 2002, 87(5-6), 446-458.
Web of Science® Times Cited: 57 |
Chapters in Books
Conference Articles
Mika Gustafsson, Michael Hörnquist, Johan Björkegren and Jesper Tegnér
Soft Integration of Data for Reverse Engineering
International Conference on Systems Biology,2008, 2008.
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Roland Nilsson, Jose M. Peña, Johan Björkegren and Jesper Tegnér
Evaluating feature selection for SVMs in high dimensions
17th European Conference on Machine Learning,2006, 2006.
Web of Science® Times Cited: 2
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Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
Reading Dependencies from the Minimal Undirected Independence Map of a Graphoid that Satisfies Weak Transitivity
3rd European Workshop on Probabilistic Graphical Models PGM2006,2006, 2006.
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Jose M. Peña, Roland Nilsson, Johan Björkegren and Jesper Tegnér
Identifying relevant nodes without learning the model
22nd Conference on Uncertainty in Artificial Intelligence,2006, 2006.
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Ph.D. Theses
Ph.D., Lic. Theses
