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Publications for Colm Nestor

Publications mentioned in social media 418 times*

Journal Articles

Antonio Lentini, Cathrine Lagerwall, Svante Vikingsson, Heidi K. Mjoseng, Dimitrios Karolos Douvlataniotis, Hartmut Vogt, Henrik Green, Richard R. Meehan, Mikael Benson and Colm Nestor
  A reassessment of DNA-immunoprecipitation-based genomic profiling
  Nature Methods, 2018, 15(7), 499-+.

Richard R. Meehan, John P. Thomson, Antonio Lentini, Colm Nestor and Sari Pennings
  DNA methylation as a genomic marker of exposure to chemical and environmental agents
  Current opinion in chemical biology, 2018, 45, 48-56.
 Web of Science® Times Cited: 1

Hui Wang, Colm Nestor, Mikael Benson and Huan Zhang
  GAB2 regulates type 2 T helper cell differentiation in humans
  Cytokine, 2017, 96, 234-237.

Rasmus Magnusson, Guido Mariotti, Mattias Köpsén, William Lövfors, Danuta Gawel, Rebecka Jornsten, Joerg Linde, Torbjorn Nordling, Elin Nyman, Sylvie Schulze, Colm Nestor, Hanmin Zhang, Gunnar Cedersund, Mikael Benson, Andreas Tjärnberg and Mika Gustafsson
  LASSIM-A network inference toolbox for genome-wide mechanistic modeling
  PloS Computational Biology, 2017, 13(6), .
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Colm Nestor, Antonio Lentini, Cathrine Hägg Nilsson, Danuta Gawel, Mika Gustafsson, Lina Mattson, Hui Wang, Olof Rundquist, Richard R. Meehan, Bernward Klocke, Martin Seifert, Stefanie M. Hauck, Helmut Laumen, Huan Zhang and Mikael Benson
  5-Hydroxymethylcytosine Remodeling Precedes Lineage Specification during Differentiation of Human CD4(+) T Cells
  Cell reports, 2016, 16(2), 559-570.
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 Web of Science® Times Cited: 9

Sandra Hellberg, Daniel Eklund, Danuta Gawel, Mattias Köpsén, Huan Zhang, Colm Nestor, Ingrid Kockum, Tomas Olsson, Thomas Skogh, Alf Kastbom, Christopher Sjöwall, Magnus Vrethem, Irene Håkansson, Mikael Benson, Maria Jenmalm, Mika Gustafsson and Jan Ernerudh
  Dynamic Response Genes in CD4+T Cells Reveal a Network of Interactive Proteins that Classifies Disease Activity in Multiple Sclerosis
  Cell reports, 2016, 16(11), 2928-2939.
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 Web of Science® Times Cited: 4

Lina Mattson, Antonio Lentini, Danuta Gawel, Tejaswi Badam, Mikael Benson, Torbjörn Ledin, Colm Nestor, Mika Gustafsson, Jordi Serra I Musach, Janne Björkander, Zou Xiang and Huan Zhang
  Potential Involvement of Type I Interferon Signaling in Immunotherapy in Seasonal Allergic Rhinitis
  Journal of Immunology Research, 2016, , .
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Mika Gustafsson, Danuta Gawel, Lars Alfredsson, Sergio Baranzini, Janne Bjorkander, Robert Blomgran, Sandra Hellberg, Daniel Eklund, Jan Ernerudh, Ingrid Kockum, Aelita Konstantinell, Riita Lahesmaa, Antonio Lentini, H. Robert I. Liljenström, Lina Mattson, Andreas Matussek, Johan Mellergård, Melissa Mendez, Tomas Olsson, Miguel A. Pujana, Omid Rasool, Jordi Serra-Musach, Margaretha Stenmarker, Subhash Tripathi, Miro Viitala, Hui Wang, Huan Zhang, Colm Nestor and Mikael Benson
  A validated gene regulatory network and GWAS identifies early regulators of T cell-associated diseases
  Science Translational Medicine, 2015, 7(313), .
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 Web of Science® Times Cited: 16

Colm E Nestor, Raffaele Ottaviano, Diana Reinhardt, Hazel A Cruickshanks, Heidi K Mjoseng, Rhoanne C McPherson, Antonio Lentini, John P Thomson, Donncha S Dunican, Sari Pennings, Stephen M Anderton, Mikael Benson and Richard R Meehan
  Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems.
  Genome Biology, 2015, 16, 11.
   Fulltext  PDF  
 Web of Science® Times Cited: 56

Sören Bruhn, Yu Fang, Fredrik Barrenäs, Mika Gustafsson, Huan Zhang, Aelita Konstantinell, Andrea Kronke, Birte Sonnichsen, Anne Bresnick, Natalya Dulyaninova, Hui Wang, Yelin Zhao, Jorg Klingelhofer, Noona Ambartsumian, Mette K. Beck, Colm Nestor, Elsa Bona, Zou Xiang and Mikael Benson
  A Generally Applicable Translational Strategy Identifies S100A4 as a Candidate Gene in Allergy
  Science Translational Medicine, 2014, 6(218), .
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 Web of Science® Times Cited: 14

Colm Nestor, Fredrik Barrenäs, Hui Wang, Antonio Lentini, Huan Zhang, Sören Bruhn, Rebecka Jornsten, Michael A. Langston, Gary Rogers, Mika Gustafsson and Mikael Benson
  DNA Methylation Changes Separate Allergic Patients from Healthy Controls and May Reflect Altered CD4(+) T-Cell Population Structure
  PLoS Genetics, 2014, 10(1), e1004059.
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 Web of Science® Times Cited: 31

Mika Gustafsson, Måns Edström, Danuta Gawel, Colm Nestor, Hui Wang, Huan Zhang, Fredrik Barrenäs, James Tojo, Ingrid Kockum, Tomas Olsson, Jordi Serra-Musach, Nuria Bonifaci, Miguel Angel Pujana, Jan Ernerudh and Mikael Benson
  Integrated genomic and prospective clinical studies show the importance of modular pleiotropy for disease susceptibility, diagnosis and treatment
  Genome Medicine, 2014, 6(17), .
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 Web of Science® Times Cited: 9

Colm E Nestor, James P Reddington, Mikael Benson and Richard R Meehan
  Investigating 5-hydroxymethylcytosine (5hmC): the state of the art
  Methods in Molecular Biology, 2014, 1094, 243-58.

Mika Gustafsson, Colm Nestor, Huan Zhang, Albert-Laszlo Barabasi, Sergio Baranzini, Soeren Brunak, Kian Fan Chung, Howard J. Federoff, Anne-Claude Gavin, Richard R. Meehan, Paola Picotti, Miguel Angel Pujana, Nikolaus Rajewsky, Kenneth G. C. Smith, Peter J. Sterk, Pablo Villoslada and Mikael Benson
  Modules, networks and systems medicine for understanding disease and aiding diagnosis
  Genome Medicine, 2014, 6(82), .
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 Web of Science® Times Cited: 61

Colm E Nestor, Elham Dadfa, Jan Ernerudh, Mika Gustafsson, Jan Fredrik Björkander, Mikael Benson and Huan Zhang
  Sublingual immunotherapy alters expression of IL-4 and its soluble and membrane-bound receptors
  Allergy. European Journal of Allergy and Clinical Immunology, 2014, 69(11), 1564-1566.
 Web of Science® Times Cited: 6

Huan Zhang, Mika Gustafsson, Colm E Nestor, Kian Fan Chung and Mikael Benson
  Targeted omics and systems medicine: personalising care
  The Lancet Respiratory Medicine, 2014, 2(10), 785-787.
 Web of Science® Times Cited: 17

Danuta Gawel, A. Rani James, Mikael Benson, R. Liljenstrom, A. Muraro, Colm Nestor, Huan Zhang and Mika Gustafsson
  The Allergic Airway Inflammation Repository - a user-friendly, curated resource of mRNA expression levels in studies of allergic airways
  Allergy. European Journal of Allergy and Clinical Immunology, 2014, 69(8), 1115-1117.
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John P. Thomson, Jennifer M. Hunter, Colm Nestor, Donncha S. Dunican, Remi Terranova, Jonathan G. Moggs and Richard R. Meehan
  Comparative analysis of affinity-based 5-hydroxymethylation enrichment techniques
  Nucleic Acids Research, 2013, 41(22), .
   Fulltext  PDF  
 Web of Science® Times Cited: 28

Huan Zhang, Colm Nestor, Shuli Zhao, Antonio Lentini, Barbara Bohle, Mikael Benson and Hui Wang
  Profiling of human CD4+ T-cell subsets identifies the TH2-specific noncoding RNA GATA3-AS1
  Journal of Allergy and Clinical Immunology, 2013, 132(4), 1005-1008.
 Web of Science® Times Cited: 29

James P Reddington, Sara M Perricone, Colm E Nestor, Judith Reichmann, Neil A Youngson, Masako Suzuki, Diana Reinhardt, Donncha S Dunican, James G Prendergast, Heidi Mjoseng, Bernard H Ramsahoye, Emma Whitelaw, John M Greally, Ian R Adams, Wendy A Bickmore and Richard R Meehan
  Redistribution of H3K27me3 upon DNA hypomethylation results in de-repression of Polycomb target genes
  Genome Biology, 2013, 14(3), R25.
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John P Thomson, Harri Lempiäinen, Jamie A Hackett, Colm E Nestor, Arne Müller, Federico Bolognani, Edward J Oakeley, Dirk Schübeler, Rémi Terranova, Diana Reinhardt, Jonathan G Moggs and Richard R Meehan
  Non-genotoxic carcinogen exposure induces defined changes in the 5-hydroxymethylome
  Genome Biology, 2012, 13(10), .
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 Web of Science® Times Cited: 49

Jamie A. Hackett, James P. Reddington, Colm E. Nestor, Donncha S. Dunican, Miguel R. Branco, Judith Reichmann, Wolf Reik, M. Azim Surani, Ian R Adams and Richard R Meehan
  Promoter DNA methylation couples genome-defence mechanisms to epigenetic reprogramming in the mouse germline
  Development, 2012, 139(19), 3623-3632.

Duncan Sproul, Robert R Kitchen, Colm E Nestor, J Michael Dixon, Andrew H Sims, David J Harrison, Bernard H Ramsahoye and Richard R Meehan
  Tissue of origin determines cancer-associated CpG island promoter hypermethylation patterns
  Genome Biology, 2012, 13(10), .
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 Web of Science® Times Cited: 87

Colm Nestor, Raffaele Ottaviano, James Reddington, Duncan Sproul, Diana Reinhardt, Donncha Dunican, Elad Katz, J Michael Dixon, David J Harrison and Richard R Meehan
  Tissue type is a major modifier of the 5-hydroxymethylcytosine content of human genes
  Genome Research, 2012, 22(3), 467-477.

Colm Nestor and Darren G Monckton
  Correlation of inter-locus polyglutamine toxicity with CAG•CTG triplet repeat expandability and flanking genomic DNA GC content
  PLoS ONE, 2011, 6(12), .

Duncan Sproul, Colm Nestor, Jayne Culley, Jacqueline H Dickson, J Michael Dixon, David J Harrison, Richard R Meehan, Andrew H Sims and Bernard H Ramsahoye
  Transcriptionally repressed genes become aberrantly methylated and distinguish tumors of different lineages in breast cancer
  Proceedings of the National Academy of Sciences of the United States of America, 2011, 108(11), 4364-4369.

Colm Nestor, Alexey Ruzov, Richard Meehan and Donncha Dunican
  Enzymatic approaches and bisulfite sequencing cannot distinguish between 5-methylcytosine and 5-hydroxymethylcytosine in DNA
  BioTechniques, 2010, 48(4), 317-319.

Nadia C Whitelaw, Suyinn Chong, Daniel K Morgan, Colm Nestor, Timothy J Bruxner, Alyson Ashe, Eleanore Lambley, Richard Meehan and Emma Whitelaw
  Reduced levels of two modifiers of epigenetic gene silencing, Dnmt3a and Trim28, cause increased phenotypic noise
  Genome Biology, 2010, 11(11), .
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Chapters in Books

John P. Thomson, Colm Nestor and Richard R. Meehan
  5-Hydroxymethylcytosine Profiling in Human DNA
  Population Epigenetics: Methods and Protocols, Humana Press, 2017, 89-98.

Colm Nestor and Richard R. Meehan
  Hydroxymethylated DNA immunoprecipitation (hmeDIP)
  Functional analysis of DNA and chromatin, Humana Press, 2014, 259-267.

Ph.D. Theses

Danuta R. Gawel
  Identification of genes and regulators that are shared across T cell associated diseases

  Fulltext PDF

* Social media data based on publications from 2011 to present and with a DOI; data delivered by Altmetric.com.


Responsible for this page: Peter Berkesand
Last updated: 2010-08-30