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Publications for Björn Wallner

Co-author map based on Web of Sciences articles 2007-

Publications mentioned in social media 32 times*

Journal Articles

Karolis Uziela, David Menendez Hurtado, Nanjiang Shu, Björn Wallner and Ame Elofsson
  Improved protein model quality assessments by changing the target function
  Proteins: Structure, Function, and Bioinformatics, 2018, 86(6), 654-663.

Arne Elofsson, Keehyoung Joo, Chen Keasar, Jooyoung Lee, Ali H. A. Maghrabi, Balachandran Manavalan, Liam J. McGuffin, David Menendez Hurtado, Claudio Mirabello, Robert Pilstål, Tomer Sidi, Karolis Uziela and Björn Wallner
  Methods for estimation of model accuracy in CASP12
  Proteins: Structure, Function, and Bioinformatics, 2018, 86, 361-373.
 Web of Science® Times Cited: 2

Cecilia Andrésen, Markus Niklasson, Sofie Cassman Eklöf, Björn Wallner and Patrik Lundström
  Biophysical characterization of the calmodulin-like domain of Plasmodium falciparum calcium dependent protein kinase 3
  PLoS ONE, 2017, 12(7), .
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Claudio Mirabello and Björn Wallner
  InterPred: A pipeline to identify and model protein-protein interactions
  Proteins: Structure, Function, and Bioinformatics, 2017, 85(6), 1159-1170.

Yan Ping Heidi Iu, Sara Helander, Anna Zimdahl Kahlin, Chun Wah Cheng, Chi Chung Shek, Moon Ho Leung, Björn Wallner, Lars-Göran Mårtensson and Malin Lindqvist Appell
  One amino acid makes a difference-Characterization of a new TPMT allele and the influence of SAM on TPMT stability
  Scientific Reports, 2017, 7, .
   Fulltext  PDF  
 Web of Science® Times Cited: 3

Karolis Uziela, David Menendez Hurtado, Nanjiang Shu, Björn Wallner and Arne Elofsson
  ProQ3D: improved model quality assessments using deep learning
  Bioinformatics, 2017, 33(10), 1578-1580.
 Web of Science® Times Cited: 6

Sankar Chandra Basu, Fredrik Söderquist and Björn Wallner
  Proteus: a random forest classifier to predict disorder-to-order transitioning binding regions in intrinsically disordered proteins
  Journal of Computer-Aided Molecular Design, 2017, 31(5), 453-466.
   Fulltext  PDF  
 Web of Science® Times Cited: 2

Amélie Wallenhammar, Madhanagopal Anandapadmanaban, Alexander Lemak, Claudio Mirabello, Patrik Lundström, Björn Wallner and Maria Sunnerhagen
  Solution NMR structure of the TRIM21 B-box2 and identification of residues involved in its interaction with the RING domain
  PLoS ONE, 2017, 12(7), .
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Sankar Chandra Basu and Björn Wallner
  DockQ: A Quality Measure for Protein-Protein Docking Models
  PLoS ONE, 2016, 11(8), e0161879.
   Fulltext  PDF  
 Web of Science® Times Cited: 6

Sankar Chandra Basu and Björn Wallner
  Finding correct protein-protein docking models using ProQDock
  Bioinformatics, 2016, 32(12), 262-270.
   Fulltext  PDF  
 Web of Science® Times Cited: 5

Madhanagopal Anandapadmanaban, Robert Pilstål, Cecilia Andrésen, Jill Trewhella, Martin Moche, Björn Wallner and Maria Sunnerhagen
  Mutation-Induced Population Shift in the MexR Conformational Ensemble Disengages DNA Binding: A Novel Mechanism for MarR Family Derepression
  Structure, 2016, 24(8), 1311-1321.
 Web of Science® Times Cited: 2

Karolis Uziela and Björn Wallner
  ProQ2: estimation of model accuracy implemented in Rosetta
  Bioinformatics, 2016, 32(9), 1411-1413.
   Fulltext  PDF  
 Web of Science® Times Cited: 14

Karolis Uziela, Nanjiang Shu, Björn Wallner and Arne Elofsson
  ProQ3: Improved model quality assessments using Rosetta energy terms
  Scientific Reports, 2016, 6, .
   Fulltext  PDF  
 Web of Science® Times Cited: 7

Gabor Bunkoczi, Björn Wallner and Randy J. Read
  Local Error Estimates Dramatically Improve the Utility of Homology Models for Solving Crystal Structures by Molecular Replacement
  Structure, 2015, 23(2), 397-406.
   Fulltext  PDF  
 Web of Science® Times Cited: 6

William B. Tu, Sara Helander, Robert Pilstål, K. Ashley Hickman, Corey Lourenco, Igor Jurisica, Brian Raught, Björn Wallner, Maria Sunnerhagen and Linda Z. Penn
  Myc and its interactors take shape
  Biochimica et Biophysica Acta. Gene Regulatory Mechanisms, 2015, 1849(5), 469-483.
 Web of Science® Times Cited: 29

Sara Helander, Meri Montecchio, Robert Pilstål, Yulong Su, Jacob Kuruvilla, Malin Johansson, Javed Mohammed, Susana Cristobal, Patrik Lundström, Rosalie Sears, Björn Wallner and Maria Sunnerhagen
  Pre-Anchoring of Pin1 to Unphosphorylated c-Myc in a Fuzzy Complex Regulates c-Myc Activity
  Structure, 2015, 23(12), 2267-2279.
 Web of Science® Times Cited: 8

Björn Wallner
  ProQM-resample: improved model quality assessment for membrane proteins by limited conformational sampling
  Bioinformatics, 2014, 30(15), 2221-2223.
   Fulltext  PDF  
 Web of Science® Times Cited: 10

Minttu T. Virkki, Christoph Peters, Daniel Nilsson, Therese Sörensen, Susana Cristobal, Björn Wallner and Arne Elofsson
  The Positive Inside Rule Is Stronger When Followed by a Transmembrane Helix
  Journal of Molecular Biology, 2014, 426(16), 2982-2991.
 Web of Science® Times Cited: 6

Manuel Bano-Polo, Luis Martinez-Gill, Björn Wallner, Jose L. Nieva, Arne Elofsson and Ismael Mingarro
  Charge Pair Interactions in Transmembrane Helices and Turn Propensity of the Connecting Sequence Promote Helical Hairpin Insertion
  Journal of Molecular Biology, 2013, 425(4), 830-840.
 Web of Science® Times Cited: 15

Arjun Ray, Erik Lindahl and Björn Wallner
  Improved model quality assessment using ProQ2
  BMC Bioinformatics, 2012, 13, .
   Fulltext  PDF  
 Web of Science® Times Cited: 67

Christine S Schwaiger, Sara Börjesson, Berk Hess, Björn Wallner, Fredrik Elinder and Erik Lindahl
  The Free Energy Barrier for Arginine Gating Charge Translation Is Altered by Mutations in the Voltage Sensor Domain
  PLoS ONE, 2012, 7(10), E45880.
   Fulltext  PDF  
 Web of Science® Times Cited: 10

Ulrike Henrion, Jakob Renhorn, Sara Börjesson, Erin M Nelson, Christine S Schwaiger, Par Bjelkmar, Björn Wallner, Erik Lindahl and Fredrik Elinder
  Tracking a complete voltage-sensor cycle with metal-ion bridges
  Proceedings of the National Academy of Sciences of the United States of America, 2012, 109(22), 8552-8557.
   Fulltext  PDF  
 Web of Science® Times Cited: 71

Ph.D. Theses

Robert Pilstål
  On protein structure, function and modularity from an evolutionary perspective

  Fulltext PDF

Markus Niklasson
  Coding to cure: NMR and thermodynamic software applied to congenital heart disease research

  Fulltext PDF

Licentiate Theses

Amélie Wallenhammar
  Protein modularity: Structure and interactions by NMR and SPR

* Social media data based on publications from 2011 to present and with a DOI; data delivered by Altmetric.com.


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Last updated: 2017-02-21